Molecular Dipole Moments
A screen saver with photos of the Precious Moments Chapel Center in Carthage, Missouri. All photos are 800x600 high-quality images (a 1024x768 version is available at Awesome-Screens.com). Other features include transition effects, black and white mode, password use, and extract photos as...
|License: Freeware||Size: 2.48 MB||Download (104): Awesome Moments Screen Saver Download|
Hidden Markov models are used to describe the "stepping" behavior of molecular motors, as measured by single-molecule fluorescence techniques. Our HMM implementation is more versatile than the one described by Milescu, et al. Biophys. J. 91:3135-3150 and can be used as a "blind" step detector or...
|License: Freeware||Size: 829.44 KB||Download (19): Hidden Markov Models for Molecular Motors Download|
this program shows the electric field propagation from infinitesimal dipole antenna
|License: Freeware||Size: 10 KB||Download (18): radiation from infinitesimal dipole Download|
ORMA (Oligonucleotide Retrieving for Molecular Applications) is a series of integrated scripts in Matlab, which performs an accurate search of all the positions able to specifically discriminate one species among homologous ones. ORMA also performs an accurate selection of high-quality...
|License: Freeware||Size: 286.72 KB||Download (18): ORMA (Oligonucleotide Retrieving for Molecular Applications) Download|
the mfile simulates the dipole antenna by FDTD method
|License: Shareware||Cost: $0.00 USD||Size: 10 KB||Download (18): Simulating dipole antenna by FDTD Download|
The EJS Molecular Dynamics model is constructed using the Lennard-Jones potential truncated at a distance of 3 molecular diameters. The motion of the molecules is governed by Newton's laws, approximated using the Verlet algorithm with the indicated time step. For sufficiently small time steps dt,...
|License: Freeware||Size: 1.3 MB||Download (17): Molecular Dynamics Model Download|
The EJS Molecular Dynamics Demonstration model is constructed using the Lennard-Jones potential truncated at a distance of 3 molecular diameters. The motion of the molecules is governed by Newton's laws, approximated using the Verlet algorithm with the indicated Time step. For sufficiently small...
|License: Freeware||Size: 1.3 MB||Download (16): Molecular Dynamics Demonstration Model Download|
The Molecular Dynamics Adiabatic Piston model shows two gas samples within a horizontal cylinder that is divided by an insulated piston that moves without friction. It is a supplemental simulation for an article by Eric Gislason "A close examination of the motion of an adiabatic piston" in the...
|License: Freeware||Size: 1.12 MB||Download (17): Molecular Dynamics Adiabatic Piston Model Download|
CHEMIX School is an educational tool for learning chemistry. It is geared toward college-level chemistry, but is also appropriate for high-school students, chemists, and teachers. It is equipped with a periodic table containing history, 19 physical properties + number of stable isotopes,...
Platforms: Windows, Windows 8, Windows 7, Windows Server
|License: Shareware||Cost: $19.00 USD||Size: 1.45 MB||Download (226): CHEMIX School Download|
Molecular Weight Calculator is an easy to use program to calculate the mass of a molecular formula and composition of each atom. Allows entry of chemical formulas in commonly-used syntax both empirical and molecuar formula.This innovative program provides a fast and easy-to-use tool. This is an...
Platforms: Pocket PC 2002
|License: Commercial||Cost: $5.00 USD||Size: 453 KB||Download (220): Molecular Weight Calculator for Pocket PC Download|
Avogadro is an advanced molecular editor designed for cross-platform use in computational chemistry, molecular modeling, bioinformatics, materials science, and related areas. This project offers a flexible rendering engine and a powerful plugin architecture. The main concept behind Avogadro...
|License: Freeware||Size: 256 KB||Download (138): Avogadro Download|
Bio::MCPrimers is a Perl module to create molecular cloning PCR primer pairs for a given gene so that the gene can be directionally inserted into a vector. Solver is generic, restriction enzymes and their order in the vector are specified in the caller. XPORT SUBROUTINES sub find_mc_primers...
|License: Freeware||Size: 174.08 KB||Download (81): Bio::MCPrimers Download|
LAMMPS project is a Molecular Dynamics Simulator. LAMMPS has potentials for soft materials (biomolecules, polymers) and solid-state materials (metals, semiconductors) and coarse-grain systems. It can be used to model atoms or, more generically, as a parallel particle simulator at the mesoscale...
|License: Freeware||Download (109): LAMMPS Download|
Open3DALIGN is an open-source software aimed at unsupervised molecular alignment. Open3DALIGN is a command-line tool which is operated by means of a few commands which can be entered interactively from a command prompt, read from a batch script or piped through standard input. If PyMOL is...
|License: Freeware||Size: 5.2 MB||Download (46): Open3DALIGN x64 Download|
BALLView is our standalone molecular modeling and visualization application. Furthermore it is also a framework for developing molecular visualization functionality. It is available free of charge under the GPL for Linux, Windows and MacOS.
It provides fast OpenGL-based visualization of...
|License: Freeware||Size: 38 MB||Download (50): BALLView Download|
PyMOL is a user-sponsored molecular visualization system on an open-source foundation. Please support development of this open, effective, and affordable software by purchasing an incentive copy, which is pre-built and comes with maintenance and support.
PyMOL can interpret over 30 different...
Platforms: Windows, Mac, Linux
|License: Freeware||Size: 9.1 MB||Download (49): PyMOL Download|
The Ascalaph Designer application was developed for molecular models and simulations. Using this application you can simulate, molecular graphics, optimization, molecular dynamics, quantum chemistry.
Two cameras per model
CPK, Wire frame,...
|License: Freeware||Size: 72 MB||Download (46): Ascalaph Designer Download|
Facio is an OpenGL-based 3D-graphics program for molecular modeling and visualization of quantum chemical calculations (GAMESS and Gaussian).
SSH / SFTP client is also implemented. Through SSH / SFTP connection, Gaussian job can be submitted to batch job system on the remote server and...
|License: Freeware||Size: 15.7 MB||Download (51): Facio Download|
Geneious is a useful, unique and easy-to-use software system which has been designed to greatly speed up and simplify the research in molecular biology and biochemistry.
Geneious is a cross-platform research engine for the retrieval, organization and analysis of biomolecular data that allows...
|License: Freeware||Size: 39.6 MB||Download (63): Geneious Basic Download|
MOPlot is a handy visualization application specially designed for fast molecular orbitals plotting from the outputs of the Gaussian 03/98/94, Molcas, Gamess/US quantum chemical calculation packages. This Molecular Orbital Plotting Program will prove to be easy-to-use and very efficient.
Platforms: Windows, XP
|License: Freeware||Download (62): MOPlot Download|